BUSpaRse::cellranger_biotypes
Cell Ranger gene biotypesBUSpaRse::ensembl_gene_biotypes
Gene biotypes from EnsemblBUSpaRse::ensembl_gff_mcols
These are the column names of the 'mcols' when the Ensembl GTF file is read into R as a 'GRanges', including 'gene_id', 'transcript_id', 'biotype', 'description', and so on, and the mandatory tags like 'ID', 'Name', and 'Parent'.BUSpaRse::ensembl_gtf_mcols
Tags in the attributes field of Ensembl GTF filesBUSpaRse::ensembl_tx_biotypes
Transcript biotypes from EnsemblBUSpaRse::refseq_gff_mcols
Tags in the attributes field of RefSeq GFF filesSpatialFeatureExperiment::visium_row_col
Row and columns of Visium barcodes on the slide